 
REBASE version 901                                              proto.901
 
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    REBASE, The Restriction Enzyme Database   http://rebase.neb.com
    Copyright (c)  Dr. Richard J. Roberts, 2018.   All rights reserved.
    =-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=
 
Rich Roberts                                                    Dec 28 2018
 



	    TYPE II ENZYMES
	    ---------------

AarI                           CACCTGC (4/8)
AatII                          GACGT^C
Aba6411II                      CRRTAAG
AbaB8342IV                     CATTAG
AbaCIII                        CTATCAV
AbaUMB2I                       YCCGSS
AbsI                           CC^TCGAGG
AccI                           GT^MKAC
Acc65V                         GACGCA
AceIII                         CAGCTC (7/11)
AchA6III                       AGCCAG
AciI                           CCGC (-3/-1)
AclI                           AA^CGTT
Aco12261II                     CCRGAG
AcoY31II                       TAGCRAB
AcyI                           GR^CGYC
Adh6U21I                       GAANCAG
AflII                          C^TTAAG
AflIII                         A^CRYGT
AgeI                           A^CCGGT
AgsI                           TTS^AA
AhaIII                         TTT^AAA
AhyRBAHI                       GCYYGAC
AhyYL17I                       YAAMGAG
AjuI                           (7/12) GAANNNNNNNTTGG (11/6)
AlfI                           (10/12) GCANNNNNNTGC (12/10)
AloI                           (7/12) GAACNNNNNNTCC (12/7)
AluI                           AG^CT
AlwFI                          GAAAYNNNNNRTG
AlwNI                          CAGNNN^CTG
AmaCSI                         GCTCCA (11/9)
Aod1I                          GATCNAC
AoxI                           ^GGCC
ApaI                           GGGCC^C
ApaBI                          GCANNNNN^TGC
ApaLI                          G^TGCAC
ApoI                           R^AATTY
ApyPI                          ATCGAC (20/18)
AquII                          GCCGNAC (20/18)
AquIV                          GRGGAAG (19/17)
ArsI                           (8/13) GACNNNNNNTTYG (11/6)
AscI                           GG^CGCGCC
Asp103I                        CGRAGGC
AspBHI                         YSCNS (8/12)
AspDUT2V                       GNGCAAC
AspJHL3II                      CGCCCAG
AspNIH4III                     AAGAACB
AspSLV7III                     GTCTCA
Asp114pII                      AGCABCC
AsuI                           G^GNCC
AsuII                          TT^CGAA
Asu14238IV                     CGTRAC
AteTI                          GGGRAG
AvaI                           C^YCGRG
AvaII                          G^GWCC
AvaIII                         ATGCAT
AvrII                          C^CTAGG
Awo1030IV                      GCCRAG
BaeI                           (10/15) ACNNNNGTAYC (12/7)
Bag18758I                      CCCGAG
BalI                           TGG^CCA
BamHI                          G^GATCC
BanLI                          RTCAGG
BarI                           (7/12) GAAGNNNNNNTAC (12/7)
Bbr11I                         GGRCAG
Bbr52II                        GGCGAG
Bbr57III                       GTRAAYG
BbuB31I                        GNAAYG
BbuB31II                       CGRKA
BbvI                           GCAGC (8/12)
BbvII                          GAAGAC (2/6)
BbvCI                          CCTCAGC (-5/-2)
BccI                           CCATC (4/5)
Bce83I                         CTTGAG (16/14)
Bce3081I                       TAGGAG
BcefI                          ACGGC (12/13)
BcgI                           (10/12) CGANNNNNNTGC (12/10)
BciVI                          GTATCC (6/5)
BclI                           T^GATCA
BdaI                           (10/12) TGANNNNNNTCA (12/10)
BetI                           W^CCGGW
BfaSII                         GANGGAG
BfiI                           ACTGGG (5/4)
BglI                           GCCNNNN^NGGC
BglII                          A^GATCT
BinI                           GGATC (4/5)
BisI                           GC^NGC
BkrAM31DI                      RTTAAATM
Ble402II                       GRAGCAG
BloAII                         GAGGAC
BmgI                           GKGCCC
BplI                           (8/13) GAGNNNNNCTC (13/8)
Bpu10I                         CCTNAGC (-5/-2)
BsaAI                          YAC^GTR
BsaBI                          GATNN^NNATC
BsaXI                          (9/12) ACNNNNNCTCC (10/7)
BsbI                           CAACAC (21/19)
BscGI                          CCCGT
BseMII                         CTCAG (10/8)
BsePI                          G^CGCGC
BseRI                          GAGGAG (10/8)
BseSI                          GKGCM^C
BseYI                          CCCAGC (-5/-1)
BsgI                           GTGCAG (16/14)
BsiI                           CACGAG (-5/-1)
BsiYI                          CCNNNNN^NNGG
BsmI                           GAATGC (1/-1)
BsmAI                          GTCTC (1/5)
Bsp24I                         (8/13) GACNNNNNNTGG (12/7)
Bsp460III                      CGCGCAG
Bsp1407I                       T^GTACA
Bsp3004IV                      CCGCAT
BspGI                          CTGGAC
BspHI                          T^CATGA
BspLU11I                       A^CATGT
BspMI                          ACCTGC (4/8)
BspMII                         T^CCGGA
BspNCI                         CCAGA
BsrI                           ACTGG (1/-1)
BsrBI                          CCGCTC (-3/-3)
BsrDI                          GCAATG (2/0)
BstEII                         G^GTNACC
BstXI                          CCANNNNN^NTGG
BtgZI                          GCGATG (10/14)
BtrI                           CACGTC (-3/-3)
BtsI                           GCAGTG (2/0)
BtsIMutI                       CAGTG (2/0)
Bve1B23I                       GACNNNNNTGG
Cac8I                          GCN^NGC
Cal14237I                      GGTTAG
CalB3II                        GRTTRAG
CauII                          CC^SGG
Cau10061II                     GTTAAT
Cba13II                        AGGAAT
Cba16038I                      CCTNAYNC
Cbo67071IV                     GCRGAAG
CchII                          GGARGA (11/9)
CchIII                         CCCAAG (20/18)
Cch467III                      GNGAAAY
Cco14983V                      GGGTDA
Cco14983VI                     GCYGA
CcrNAIII                       CGACCAG
CdiI                           CATCG (-1/-1)
Cdi81III                       GCMGAAG
Cdi11397I                      GCGCAG
CdpI                           GCGGAG (20/18)
Cdu23823II                     GTGAAG
CfrI                           Y^GGCCR
Cfr10I                         R^CCGGY
CfrMH13II                      AGCANCC
CfrMH16VI                      CTAAAG
Cfupf3II                       GARCAG
Cgl13032I                      GGCGCA
Cgl13032II                     ACGABGG
CjeI                           (8/14) CCANNNNNNGT (15/9)
Cje265V                        GKAAGC
Cje54107III                    GKAAYC
CjeFIII                        GCAAGG
CjeFV                          GGRCA
CjeNII                         GAGNNNNNGT
CjeNIII                        GKAAYG (19/17)
CjeNV                          CCYGA
CjePI                          (7/13) CCANNNNNNNTC (14/8)
CjeP659IV                      CACNNNNNNNGAA
CjuI                           CAYNNNNNRTG
CjuII                          CAYNNNNNCTC
ClaI                           AT^CGAT
Cla11845III                    GCGAA
Cly7489II                      AAAAGRG
Cma23826I                      CGGAAG
Csp2014I                       GGAGGC
CspCI                          (11/13) CAANNNNNGTGG (12/10)
CstMI                          AAGGAG (20/18)
CviJI                          RG^CY
CviRI                          TG^CA
DdeI                           C^TNAG
Dde51507I                      CCWGG
DpnI                           GA^TC
DraII                          RG^GNCCY
DraIII                         CACNNN^GTG
DraRI                          CAAGNAC (20/18)
DrdI                           GACNNNN^NNGTC
DrdII                          GAACCA
DsaI                           C^CRYGG
Eam1105I                       GACNNN^NNGTC
EciI                           GGCGGA (11/9)
Ecl234I                        CGGNAAG
Ecl35734I                      GAAAYTC
Eco31I                         GGTCTC (1/5)
Eco47III                       AGC^GCT
Eco57I                         CTGAAG (16/14)
Eco4465II                      GAAABCC
Eco43896II                     CRARCAG
EcoBLMcrX                      RCSRC (-3/-2)
EcoE1140I                      ACCYAC
Eco57MI                        CTGRAG (16/14)
EcoMVII                        CANCATC
EcoNI                          CCTNN^NNNAGG
EcoNIH6II                      ATGAAG
EcoRI                          G^AATTC
EcoRII                         ^CCWGG
EcoRV                          GAT^ATC
Eli8509II                      CCGGAG
EsaSSI                         GACCAC
EspI                           GC^TNAGC
Esp3I                          CGTCTC (1/5)
Esp3007I                       CAGAAG
Exi27195I                      GCCGAC
FaiI                           YA^TR
FalI                           (8/13) AAGNNNNNCTT (13/8)
FauI                           CCCGC (4/6)
Fco1691IV                      GCVGAG
FinI                           GGGAC
FnuDII                         CG^CG
Fnu4HI                         GC^NGC
FokI                           GGATG (9/13)
FseI                           GGCCGG^CC
FspAI                          RTGC^GCAY
FspEI                          CC (12/16)
FspPK15I                       GARGAAG
FtnUV                          GAAACA
GauT27I                        CGCGCAGG
Gba708II                       ATGCAC
GdiII                          CGGCCR (-5/-1)
GlaI                           GC^GC
GsuI                           CTGGAG (16/14)
HaeI                           WGG^CCW
HaeII                          RGCGC^Y
HaeIII                         GG^CC
HaeIV                          (7/13) GAYNNNNNRTC (14/9)
HbaII                          GCCCAG
HdeNY26I                       CGANNNNNNTCC
HdeZA17I                       GCANNNNNNTCC
HgaI                           GACGC (5/10)
HgiAI                          GWGCW^C
HgiCI                          G^GYRCC
HgiEII                         ACCNNNNNNGGT
HgiJII                         GRGCY^C
HhaI                           GCG^C
Hin4I                          (8/13) GAYNNNNNVTC (13/8)
Hin4II                         CCTTC (6/5)
HindII                         GTY^RAC
HindIII                        A^AGCTT
HinfI                          G^ANTC
HpaI                           GTT^AAC
HpaII                          C^CGG
HphI                           GGTGA (8/7)
Hpy99I                         CGWCG^
Hpy99XIII                      GCCTA
Hpy99XIV                       GGWTAA
Hpy99XIV-mut1                  GGWCNA
Hpy99XXII                      TCANNNNNNTRG
Hpy178III                      TC^NNGA
Hpy188I                        TCN^GA
Hpy300XI                       CCTYNA
HpyAXIV                        GCGTA
HpyAXVI-mut1                   CRTTAA
HpyAXVI-mut2                   CRTCNA
HpyUM032XIII                   CYANNNNNNNTRG
HpyUM032XIII-mut1              CYANNNNNNNTTC
HpyUM032XIV                    GAAAG
HpyUM037X                      GTGGNAG, TNGGNAG
Jma19592I                      GTATNAC
Jma19592II                     GRGCRAC
Jsp2502II                      GRNGAAT
Kor51II                        RTCGAG
KpnI                           GGTAC^C
Kpn156V                        CRTGATT
Kpn327I                        GACATC
KpnNH25III                     CTRGAG
KpnNIH30III                    GTTCNAC
KpnNIH50I                      GCYAAG
KroI                           G^CCGGC
Ksp632I                        CTCTTC (1/4)
Lba2029III                     CYAAANG
Lde4408II                      ACAAAG
LlaG50I                        CCGTKA
LmnI                           GCTCC (1/-1)
Lmo370I                        AGCGCCG
Lmo911II                       TAGRAG
Lpl1004II                      AGGRAG
LpnPI                          CCDG (10/14)
Lra68I                         GTTCNAG
LsaDS4I                        TGGAAT
Lsp48III                       AGCACC
Lsp6406VI                      CRAGCAC
MaeI                           C^TAG
MaeII                          A^CGT
MaeIII                         ^GTNAC
MaqI                           CRTTGAC (21/19)
MauBI                          CG^CGCGCG
Mba11I                         AGGCGA
MboI                           ^GATC
MboII                          GAAGA (8/7)
McrI                           CGRY^CG
Mcr10I                         GAAGNNNNNCTC
MfeI                           C^AATTG
MjaIV                          GTNNAC
MkaDII                         GAGAYGT
MluI                           A^CGCGT
Mlu211III                      AGCCCA
MmeI                           TCCRAC (20/18)
MnlI                           CCTC (7/6)
MseI                           T^TAA
MslI                           CAYNN^NNRTG
MspI7II                        ACGRAG
MspJI                          CNNR (9/13)
MspSC27II                      CCGCGAC
MstI                           TGC^GCA
MteI                           GCGC^NGCGC
MtuHN878II                     CACGCAG
MwoI                           GCNNNNN^NNGC
NaeI                           GCC^GGC
Nal45188II                     ACCAGC
NarI                           GG^CGCC
Nbr128II                       ACCGAC
NcoI                           C^CATGG
NdeI                           CA^TATG
NgoAVII                        GCCGC (7/7)
NgoAVIII                       (12/14) GACNNNNNTGA (13/11)
NhaXI                          CAAGRAG
NheI                           G^CTAGC
NhoI                           GCWGC
NlaIII                         CATG^
NlaIV                          GGN^NCC
NlaCI                          CATCAC (19/17)
NmeAIII                        GCCGAG (21/19)
NotI                           GC^GGCCGC
NpeUS61II                      GATCGAC
NruI                           TCG^CGA
NspI                           RCATG^Y
NspBII                         CMG^CKG
ObaBS10I                       ACGAG
OliI                           CACNN^NNGTG
OspHL35III                     YAGGAG
PacI                           TTAAT^TAA
PacIII                         GTAATC
Pac19842II                     CCTTGA
Pal408I                        CCRTGAG
PasI                           CC^CWGGG
Pba2294I                       GTAAG
PcaII                          GACGAG
Pcr308II                       CCAAAG
PcsI                           WCGNNNN^NNNCGW
Pdi8503III                     CCGGNAG
Pdu1735I                       CACCAC
PenI                           GCAGT
Pfl1108I                       TCGTAG
Pfl8569I                       GCN^NGC
PflMI                          CCANNNN^NTGG
PflPt14I                       RGCCCAC
PfoI                           T^CCNGGA
PfrJS12IV                      TANAAG
PfrJS12V                       GGCGGAG
PfrJS15III                     CTTCNAC
Pin17FIII                      GGYGAB
PinP23II                       CTRKCAG
PinP59III                      GAAGNAG
PleI                           GAGTC (4/5)
PliMI                          CGCCGAC
PmaCI                          CAC^GTG
PmeI                           GTTT^AAAC
PpiI                           (7/12) GAACNNNNNCTC (13/8)
PpiP13II                       CGCRGAC
PpuMI                          RG^GWCCY
Pse18267I                      RCCGAAG
PshAI                          GACNN^NNGTC
PsiI                           TTA^TAA
Psp0357II                      GCGAAG
PspOMII                        CGCCCAR (20/18)
PspPRI                         CCYCAG (15/13)
PspXI                          VC^TCGAGB
PsrI                           (7/12) GAACNNNNNNTAC (12/7)
PstI                           CTGCA^G
Pst145I                        CTAMRAG
Pst273I                        GATCGAG
Pst14472I                      CNYACAC
PsuGI                          BBCGD
PvuI                           CGAT^CG
PvuII                          CAG^CTG
Rba2021I                       CACGAGH
RceI                           CATCGAC (20/18)
RdeGBI                         CCGCAG
RdeGBII                        ACCCAG (20/18)
RdeGBIII                       (9/11) TGRYCA (11/9)
RflFIII                        CGCCAG
RlaI                           VCW
RlaII                          ACACAG (20/18)
RleAI                          CCCACA (12/9)
Rmu369III                      GGCYAC
RpaI                           GTYGGAG (11/9)
RpaBI                          CCCGCAG (20/18)
RpaB5I                         CGRGGAC (20/18)
RpaTI                          GRTGGAG
RsaI                           GT^AC
Rsp008IV                       ACGCAG
Rsp008V                        GCCCAT
Rsp531II                       CACACG
RspPBTS2III                    CTTCGAG
RsrII                          CG^GWCCG
Rtr1953I                       TGANNNNNNTGA
SacI                           GAGCT^C
SacII                          CCGC^GG
Saf8902III                     CAATNAG
Sag901I                        GCAAAT
SalI                           G^TCGAC
SanDI                          GG^GWCCC
SapI                           GCTCTTC (1/4)
SauI                           CC^TNAGG
Sba460II                       GGNGAYG
Sbo46I                         TGAAC
ScaI                           AGT^ACT
ScoDS2II                       GCTAAT
ScrFI                          CC^NGG
SdeAI                          CAGRAG (21/19)
SdeOSI                         (11/13) GACNNNNRTGA (12/10)
SduI                           GDGCH^C
SecI                           C^CNNGG
Sen17963III                    CCAAAC
SenA1673III                    GNGGCAG
SenSARA26III                   ACRCAG
SenTFIV                        GATCAG
SetI                           ASST^
SexAI                          A^CCWGGT
SfaNI                          GCATC (5/9)
SfeI                           C^TRYAG
SfiI                           GGCCNNNN^NGGCC
SgeI                           CNNGNNNNNNNNN^
SgfI                           GCGAT^CGC
SgrAI                          CR^CCGGYG
SgrDI                          CG^TCGACG
SgrTI                          CCDS (10/14)
SimI                           GGGTC (-3/0)
SmaI                           CCC^GGG
SmaUMH5I                       CTTGAC
SmaUMH8I                       GCGAACB
SmlI                           C^TYRAG
SnaI                           GTATAC
SnaBI                          TAC^GTA
Sno506I                        GGCCGAG
SpeI                           A^CTAGT
SphI                           GCATG^C
SplI                           C^GTACG
SpnRII                         TCGAG
SpoDI                          GCGGRAG
SrfI                           GCCC^GGGC
Sse232I                        CG^CCGGCG
Sse8387I                       CCTGCA^GG
Sse8647I                       AG^GWCCT
SspI                           AAT^ATT
Ssp714II                       CGCAGCG
Ssp6803IV                      GAAGGC
SstE37I                        CGAAGAC (20/18)
Sth132I                        CCCG (4/8)
Sth20745III                    GGACGAC
SthSt3II                       GAAGT
StuI                           AGG^CCT
StyI                           C^CWWGG
SurP32aII                      ACRGAG
SwaI                           ATTT^AAAT
TaqI                           T^CGA
TaqII                          GACCGA (11/9)
TaqIII                         CACCCA (11/9)
TatI                           W^GTACW
TauI                           GCSG^C
TfiI                           G^AWTC
TseI                           G^CWGC
TsoI                           TARCCA (11/9)
Tsp45I                         ^GTSAC
TspARh3I                       GRACGAC
Tsp4CI                         ACN^GT
TspDTI                         ATGAA (11/9)
TspEI                          ^AATT
TspGWI                         ACGGA (11/9)
TspRI                          CASTGNN^
TssI                           GAGNNNCTC
TstI                           (8/13) CACNNNNNNTCC (12/7)
TsuI                           GCGAC
Tth111I                        GACN^NNGTC
Tth111II                       CAARCA (11/9)
UbaF9I                         TACNNNNNRTGT
UbaF11I                        TCGTA
UbaF12I                        CTACNNNGTC
UbaF13I                        GAGNNNNNNCTGG
UbaF14I                        CCANNNNNTCG
UbaPI                          CGAACG
Van9116I                       CCKAAG
VchE4II                        RTAAAYG
Vdi96II                        GNCYTAG
VspI                           AT^TAAT
Vtu19109I                      CACRAYC
WviI                           CACRAG (21/19)
XbaI                           T^CTAGA
Xca85IV                        TACGAG
XcmI                           CCANNNNN^NNNNTGG
XhoI                           C^TCGAG
XhoII                          R^GATCY
XmaIII                         C^GGCCG
XmnI                           GAANN^NNTTC
Yps3606I                       CGGAAG



	    TYPE I ENZYMES
	    ---------------

HpyAXVIII                      GGANNAG
LlaGI                          CTNGAYG
SpnD39IIIB                     CRAANNNNNNNNNTTC
SpnD39IIIC                     CACNNNNNNNCTT
SpnD39IIID                     CACNNNNNNNCTG



	    TYPE III ENZYMES
	    ---------------

EcoP15I                        CAGCAG (25/27)
PstII                          CTGATG (25/27)

